STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24015.1Penicillin-binding protein 1A. (754 aa)    
Predicted Functional Partners:
ftsI
Penicillin-binding protein 3.
 
 
 0.984
ACP24901.1
Penicillin binding peptidoglycan synthetase protein.
 
 
0.938
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
  
0.928
ACP24563.1
Penicillin-binding protein 1A.
  
  
 
0.918
ACP24308.1
Putative D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.916
ACP27232.1
Penicillin-binding protein, 1A family.
  
  
 
0.916
ACP25374.1
Penicillin binding protein; Belongs to the peptidase S11 family.
   
 
 0.904
ftsW
Cell division protein FtsW; Belongs to the SEDS family.
 
 
 
 0.697
ACP25300.1
Membrane protein associated metalloendopeptidase.
  
   
 0.640
ACP25158.1
Lipoprotein.
 
  
 0.629
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.