STRINGSTRING
NGR_c02230 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c02230" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c02230annotation not available (146 aa)    
Predicted Functional Partners:
NGR_c02250
annotation not available (158 aa)
 
          0.898
hisD2
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (460 aa)
              0.883
NGR_c02260
annotation not available (143 aa)
 
          0.819
dcd
annotation not available (365 aa)
 
          0.726
NGR_c34150
annotation not available (437 aa)
   
          0.723
NGR_c08550
annotation not available (202 aa)
   
          0.719
NGR_c32400
annotation not available (135 aa)
   
          0.654
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily (430 aa)
              0.640
NGR_c34140
annotation not available (193 aa)
   
          0.621
hisS
annotation not available (507 aa)
   
          0.603
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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