close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24041.1Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. (699 aa)    
Predicted Functional Partners:
ACP24040.1
L-rhamnose isomerase.
 
     0.952
ACP24042.1
Transcriptional regulator, DeoR family.
 
  
 0.915
ACP24048.1
Predicted carbohydrate kinase contains FGGY family domain.
 
  
 0.892
rhaM
Putative L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
  
 0.888
ACP24043.1
Rhamnose ABC transporter, periplasmic rhamnose-binding protein.
 
     0.842
ACP24046.1
Predicted ABC transporter, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.756
ACP24045.1
Predicted ABC transporter, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.721
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 
 0.706
betC
Choline-sulfatase.
  
 
 0.586
ACP24009.1
Beta-ketoacyl synthase.
  
 
 0.549
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.