STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24042.1Transcriptional regulator, DeoR family. (270 aa)    
Predicted Functional Partners:
ACP24041.1
Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
  
 0.915
ACP24043.1
Rhamnose ABC transporter, periplasmic rhamnose-binding protein.
 
    0.874
ACP24048.1
Predicted carbohydrate kinase contains FGGY family domain.
 
  
 0.849
ACP24040.1
L-rhamnose isomerase.
 
     0.834
rhaM
Putative L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
    0.790
ACP24046.1
Predicted ABC transporter, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.736
ACP27012.1
Putative transcriptional regulator, DeoR family.
  
     0.717
ACP24045.1
Predicted ABC transporter, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.692
rbsA2
Ribose import ATP-binding protein RbsA1; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
   
 0.592
ACP23819.1
Predicted phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2.
 
  
 0.411
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.