STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24043.1Rhamnose ABC transporter, periplasmic rhamnose-binding protein. (329 aa)    
Predicted Functional Partners:
ACP24046.1
Predicted ABC transporter, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.984
ACP24045.1
Predicted ABC transporter, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.982
rbsA2
Ribose import ATP-binding protein RbsA1; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.967
ACP24042.1
Transcriptional regulator, DeoR family.
 
    0.874
ACP24048.1
Predicted carbohydrate kinase contains FGGY family domain.
 
  
 0.867
rhaM
Putative L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
    0.859
ACP24041.1
Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
     0.842
ACP24040.1
L-rhamnose isomerase.
 
     0.794
ACP23914.1
Putative ribose transport system, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.538
ACP24446.1
Hypothetical ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.509
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.