STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24046.1Predicted ABC transporter, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (334 aa)    
Predicted Functional Partners:
rbsA2
Ribose import ATP-binding protein RbsA1; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.992
ACP24043.1
Rhamnose ABC transporter, periplasmic rhamnose-binding protein.
 0.985
ACP24045.1
Predicted ABC transporter, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.963
ACP24048.1
Predicted carbohydrate kinase contains FGGY family domain.
 
  
 0.939
rhaM
Putative L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
    0.918
ACP27098.1
Periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.816
ACP24420.1
Putative ribose ABC transporter, ribose-binding protein.
 
 
 0.802
ACP24445.1
Putative solute-binding component of ABC transporter.
 
 
 0.768
ACP24041.1
Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
    0.755
ACP25502.1
Putative ribose transport system, substrate-binding protein.
 
 
 0.751
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.