Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP24048.1Predicted carbohydrate kinase contains FGGY family domain. (456 aa)    
Predicted Functional Partners:
rhaM
Putative L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
  
 0.965
ACP24045.1
Predicted ABC transporter, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.946
ACP24046.1
Predicted ABC transporter, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.939
rbsA2
Ribose import ATP-binding protein RbsA1; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  
 0.880
ACP24043.1
Rhamnose ABC transporter, periplasmic rhamnose-binding protein.
 
  
 0.867
ACP24041.1
Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
   
 0.866
ACP24040.1
L-rhamnose isomerase.
 
   
 0.856
ACP24042.1
Transcriptional regulator, DeoR family.
 
   
 0.845
ACP24399.1
long-chain-fatty-acid--CoA ligase.
   
 
 0.501
ACP23911.1
Putative RbsD/FucU transport protein; Belongs to the RbsD / FucU family.
 
  
 0.471
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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