Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP24086.1Hypothetical protein. (217 aa)    
Predicted Functional Partners:
motC
Chemotaxis protein motility protein C.
 
     0.958
motD
Chemotaxis protein motility protein D.
 
     0.957
motB
Chemotaxis protein motility protein B.
 
     0.908
ACP24090.1
Putative lytic transglycosylase-like protein, catalytic.
 
     0.899
fliL
Putative flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
   
 0.822
flgL
Predicted flagellar hook-associated protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
   
 0.817
ACP24104.1
Hypothetical protein.
 
   
 0.816
flaF
Predicted flagellar protein FlaF.
 
     0.813
ACP24078.1
Conserved hypothetical protein.
 
   
 0.807
fliM
Flagellar motor switch protein FliM.
 
   
 0.801
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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