Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP24104.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
ACP24102.1
Conserved hypothetical protein.
 
   
 0.926
ACP24103.1
Hypothetical protein.
     
 0.883
flgL
Predicted flagellar hook-associated protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
   
 0.868
flaF
Predicted flagellar protein FlaF.
 
     0.858
flbT
Predicted flagellum biosynthesis repressor protein FlbT; Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation.
 
   
 0.858
flgK
Predicted flagellar hook-associated protein FlgK.
 
   
 0.832
fliL
Putative flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
   
 0.820
ACP24086.1
Hypothetical protein.
 
   
 0.816
motC
Chemotaxis protein motility protein C.
 
     0.805
ACP24091.1
Two component transcriptional regulator, winged helix family.
 
     0.804
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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