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NGR_c03280 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c03280" - Putrescine-binding periplasmic protein in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c03280Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine (364 aa)    
Predicted Functional Partners:
potI
annotation not available (273 aa)
 
  0.998
potH
annotation not available (303 aa)
 
  0.995
potA
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (381 aa)
  0.982
NGR_c21720
annotation not available (271 aa)
   
  0.847
NGR_c25310
annotation not available (284 aa)
 
   
  0.772
NGR_c25300
annotation not available (266 aa)
   
  0.768
NGR_c21710
annotation not available (316 aa)
 
   
  0.710
NGR_c21700
annotation not available (332 aa)
 
  0.560
NGR_c29160
annotation not available (251 aa)
 
          0.475
glnA1
annotation not available (478 aa)
 
          0.449
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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