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NGR_c03340 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c03340" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c03340annotation not available (560 aa)    
Predicted Functional Partners:
NGR_c03440
annotation not available (347 aa)
 
 
  0.973
NGR_c13700
annotation not available (369 aa)
   
  0.923
NGR_a03660
Probable ABC transporter periplasmic-binding protein y4fP; Probably part of the binding-protein-dependent transport system y4fNOP (358 aa)
 
 
  0.889
NGR_c19550
annotation not available (326 aa)
 
 
  0.872
NGR_a03680
Probable ABC transporter permease protein y4fN; Probably part of the binding-protein-dependent transport system y4fNOP. Probably responsible for the translocation of the substrate across the membrane (569 aa)
   
   
    0.865
NGR_c19530
annotation not available (329 aa)
   
  0.837
NGR_c19540
annotation not available (674 aa)
   
   
 
0.825
NGR_c03350
annotation not available (1117 aa)
              0.620
ftsQ
Cell division protein FtsQ; Essential cell division protein (316 aa)
       
 
  0.549
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (811 aa)
     
      0.511
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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