Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACP24141.1Extracelluar solute-binding protein, family 1. (347 aa)    
Predicted Functional Partners:
ACP24132.1
ABC transporter, membrane spanning protein.
 
 
 0.979
ACP25150.1
ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.938
ACP25717.1
Putative transmembrane component of ABC transporter.
  
 
 0.913
ACP25718.1
Putative solute-binding component of ABC transporter.
     
 0.912
ACP27381.1
Conserved hypothetical protein.
  
    0.893
ACP25716.1
Putative ATP-binding component of ABC transporter.
 
 
  0.827
ACP27380.1
Conserved hypothetical protein.
 
    0.629
dppA
Periplasmic dipeptide ABC transport protein precursor DppA.
     
 0.549
ACP26567.1
Flagellar motor protein.
    
   0.547
RirA
Putative transcriptional regulator, Rrf2 family.
  
  
 0.545
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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