STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppAPeriplasmic dipeptide ABC transport protein precursor DppA. (531 aa)    
Predicted Functional Partners:
dppB
Dipeptide ABC transport system permease protein DppB.
 0.994
dppC
Dipeptide ABC transport system permease protein DppC.
 0.992
dppD
Dipeptide ABC transporter ATP-binding protein DppD.
 
 
 0.988
dppF
Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily.
 
 
 0.985
ACP26201.1
Binding-protein-dependent transport systems inner membrane component.
 
 0.827
ACP26200.1
Putative transmembrane component of ABC transporter.
 
 0.785
ACP25924.1
Putative permease component of ABC transporter.
 
 0.718
ACP25925.1
Putative ABC transporter, permease protein.
 
 0.678
ACP26199.1
Dipeptide ABC transporter, ATP-binding protein.
 
  
 0.527
ACP26202.1
ABC transporter, periplasmic oligopeptide-binding protein.
  
  
 
0.479
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.