Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
dppCDipeptide ABC transport system permease protein DppC. (302 aa)    
Predicted Functional Partners:
dppB
Dipeptide ABC transport system permease protein DppB.
 0.999
dppD
Dipeptide ABC transporter ATP-binding protein DppD.
 0.999
dppF
Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily.
 0.999
dppA
Periplasmic dipeptide ABC transport protein precursor DppA.
 0.996
ACP26199.1
Dipeptide ABC transporter, ATP-binding protein.
 
 0.984
ACP26198.1
Putative ATP-binding component of ABC transporter.
  
 0.969
ACP26201.1
Binding-protein-dependent transport systems inner membrane component.
 
 0.969
ACP25924.1
Putative permease component of ABC transporter.
 
 0.968
ACP25926.1
Putative ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.948
ACP27203.1
ABC transporter related; Belongs to the ABC transporter superfamily.
  
 0.931
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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