STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24156.1FAD dependent oxidoreductase. (417 aa)    
Predicted Functional Partners:
ACP26706.1
Putative D-amino acid dehydrogenase.
  
  
 
0.926
ACP26760.1
D-amino-acid dehydrogenase, FAD dependent.
  
  
 
0.922
hisC2
Histidinol-phosphate aminotransferase 2; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
  0.913
ACP26744.1
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.907
ACP25081.1
D-alanine aminotransferase protein.
     
 0.902
ACP27368.1
Aspartate aminotransferase.
     
 0.901
ACP24603.1
Histidinol-phosphate aminotransferase.
   
 
  0.900
aatA3
Aspartate aminotransferase A.
     
  0.900
hisC1
Histidinol-phosphate aminotransferase 1; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
  0.900
attA1
Aspartate aminotransferase.
     
  0.900
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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