Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP24202.1Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain precursor. (928 aa)    
Predicted Functional Partners:
ACP26710.1
Sensory box/GGDEF family protein.
 
 
0.911
ACP24336.1
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain.
 
 
0.910
ACP25843.1
Conserved hypothetical protein.
 
 
 0.846
ACP24497.1
Putative GGDEF/EAL sensory box protein.
 
 
0.842
ACP26591.1
Putative GGDEF family regulator.
 
 
 0.840
ACP26753.1
Putative transmembrane GGDEF/EAL domain protein.
 
 
0.839
ACP24226.1
Putative two-component sensor histidine kinase protein.
  
 
 0.816
cpaE1
Pilus assembly protein CpaE.
   
    0.810
ACP26605.1
Putative response regulator/GGDEF domain transcriptional regulator.
 
 
0.781
ACP25415.1
Two component sensor kinase.
  
 
 0.745
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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