STRINGSTRING
NGR_c04240 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c04240" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c04240annotation not available (78 aa)    
Predicted Functional Partners:
NGR_c04230
annotation not available (272 aa)
          0.931
kdtA
annotation not available (437 aa)
              0.809
NGR_c04260
annotation not available (234 aa)
              0.775
NGR_c27550
annotation not available (91 aa)
   
          0.744
NGR_c00190
annotation not available (187 aa)
   
          0.664
NGR_c04220
annotation not available (453 aa)
              0.629
dcd
annotation not available (365 aa)
   
          0.629
NGR_c32400
annotation not available (135 aa)
   
          0.600
lpxK
Tetraacyldisaccharide 4’-kinase; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (346 aa)
              0.581
NGR_c12580
annotation not available (148 aa)
 
 
      0.572
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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