STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24227.1Putative sensory box/GGDEF family protein. (446 aa)    
Predicted Functional Partners:
ACP27241.1
Putative chemotaxis protein methyltransferase.
 
  
 0.714
ACP26710.1
Sensory box/GGDEF family protein.
 
 
0.712
ACP24336.1
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain.
 
 
0.638
ACP24497.1
Putative GGDEF/EAL sensory box protein.
 
 
0.573
ACP26753.1
Putative transmembrane GGDEF/EAL domain protein.
 
 
0.559
ACP26605.1
Putative response regulator/GGDEF domain transcriptional regulator.
 
0.541
ACP25470.1
GGDEF family protein.
 
0.490
ACP25262.1
Putative transmembrane GGDEF sensory box protein.
 
0.479
ACP25306.1
GGDEF family protein.
 
0.478
cpaE1
Pilus assembly protein CpaE.
   
    0.436
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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