STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24230.1Gluconolactonase. (294 aa)    
Predicted Functional Partners:
dgoK
2-dehydro-3-deoxygalactonokinase.
 
   
 0.931
dgoA
Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase.
 
   
 0.895
ACP24233.1
Short-chain dehydrogenase/reductase.
 
  
 0.835
ACP24234.1
Putative IclR family transcriptional regulator.
      0.604
ACP24229.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
   
 0.594
ACP24531.1
Glucose dehydrogenase (pyrroloquinoline-quinone) protein.
     
 0.587
ACP24696.1
Galactose 1-dehydrogenase.
 
  
 0.509
galM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
   
 0.473
kdgK
2-dehydro-3-deoxygluconokinase.
 
   
 0.455
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 
 0.432
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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