Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP24236.1Putative LuxR/GerE family transcriptional regulator. (257 aa)    
Predicted Functional Partners:
ACP24235.1
Putative LuxR/GerE family transcriptional regulator.
 
  
 
0.953
ACP25455.1
Autoinducer synthetase-like protein, NgrI.
 
  
 0.646
ACP24009.1
Beta-ketoacyl synthase.
  
  
 0.454
ACP25454.1
Transcriptional regulator NgrR, LuxR family.
 
 
0.405
ACP25433.1
Kinesin-like protein.
  
     0.403
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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