STRINGSTRING
NGR_c04590 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c04590" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c04590annotation not available (73 aa)    
Predicted Functional Partners:
NGR_c04600
annotation not available (257 aa)
              0.760
ispB
annotation not available (338 aa)
              0.693
NGR_c00880
annotation not available (493 aa)
   
          0.658
NGR_c12450
annotation not available (145 aa)
   
          0.645
NGR_c04610
annotation not available (288 aa)
              0.625
NGR_c23380
annotation not available (689 aa)
   
          0.577
NGR_c26970
annotation not available (871 aa)
   
          0.574
NGR_c02230
annotation not available (146 aa)
   
          0.519
NGR_c23370
annotation not available (937 aa)
   
          0.513
NGR_c34910
annotation not available (165 aa)
   
          0.501
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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