Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ACP24271.1c-di-GMP phosphodiesterase A-related protein. (903 aa)    
Predicted Functional Partners:
ACP26591.1
Putative GGDEF family regulator.
 
 
 0.803
ACP24272.1
Putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein.
  
    0.782
ACP26710.1
Sensory box/GGDEF family protein.
 
 
0.738
ACP24336.1
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain.
 
 
0.680
ACP24497.1
Putative GGDEF/EAL sensory box protein.
 
 
0.603
ACP26753.1
Putative transmembrane GGDEF/EAL domain protein.
 
 
0.601
purD
Phosphoribosylamine--glycine ligase; GARS; glycinamideribonucleotide synthetase; phosphoribosylglycinamide synthetase; Belongs to the GARS family.
       0.542
ACP24273.1
Putative transmembrane MFS family transporter protein.
       0.517
ACP26605.1
Putative response regulator/GGDEF domain transcriptional regulator.
 
 
0.512
ACP26220.1
Putative sensor histidine kinase (HWE) with PAS and response regulator receiver domains.
 
 
 
 0.434
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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