STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24278.1FAD dependent oxidoreductase. (476 aa)    
Predicted Functional Partners:
ACP24279.1
Sua5 family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.710
ACP24280.1
Hypothetical protein.
       0.548
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 
 0.513
lldD
L-lactate dehydrogenase (cytochrome) protein.
 
 0.498
ACP24009.1
Beta-ketoacyl synthase.
  
 
 0.489
ACP24191.1
Glycolate oxidase, iron-sulphur subunit.
  
 0.465
ACP26440.1
Electron transfer flavoprotein, alpha subunit.
 
 
 0.464
ACP25807.1
Electron transfer flavoprotein, alpha subunit.
 
 
 0.461
ACP25806.1
Electron transfer flavoprotein, beta subunit.
 
 
 0.437
ACP26439.1
beta-ETF; electrontransfer flavoprotein small subunit; ETFSS.
 
 
 0.437
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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