Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP24282.1Putative dioxygenase, alpha-subunit. (416 aa)    
Predicted Functional Partners:
ACP24283.1
Putative dioxygenase reductase subunit.
 
 0.997
ACP26388.1
Putative dioxygenase reductase subunit.
 
 0.991
ACP25943.1
Dimethylglycine dehydrogenase precursor; Belongs to the GcvT family.
  
 
 0.911
betB
Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.
   
 
 0.902
ACP26759.1
Betaine aldehyde dehydrogenase; BADH; Belongs to the aldehyde dehydrogenase family.
   
 
 0.902
ACP26389.1
Putative ring hydroxylating dioxygenase subunit.
  
  
 
0.901
soxD1
Sarcosine oxidase, delta subunit.
 
    0.859
ACP25804.1
Putative flavoprotein oxidoreductase.
 
  
 0.791
soxA1
Sarcosine oxidase, alpha subunit.
 
  
 0.719
soxA2
Sarcosine oxidase, alpha subunit.
 
  
 0.688
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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