STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24282.1Putative dioxygenase, alpha-subunit. (416 aa)    
Predicted Functional Partners:
ACP24283.1
Putative dioxygenase reductase subunit.
  
 0.984
ACP26388.1
Putative dioxygenase reductase subunit.
  
 0.937
soxD1
Sarcosine oxidase, delta subunit.
 
    0.822
ACP25804.1
Putative flavoprotein oxidoreductase.
 
  
 0.790
soxA1
Sarcosine oxidase, alpha subunit.
 
  
 0.723
soxA2
Sarcosine oxidase, alpha subunit.
 
  
 0.692
paaK
phenylacetate-CoA oxygenase/reductase PaaK.
 
  
 0.688
soxG2
Sarcosine oxidase, gamma subunit.
 
    0.655
soxG1
Sarcosine oxidase, gamma subunit.
 
    0.647
soxD2
Sarcosine oxidase, delta subunit.
 
    0.551
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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