Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACP24284.1Glycoside hydrolase family 25 protein. (341 aa)    
Predicted Functional Partners:
ACP24105.1
Putative glycosyl transferase family 2.
  
     0.745
ACP25139.1
Putative outer membrane transport protein.
  
     0.739
ACP26752.1
Conserved hypothetical protein.
  
     0.739
ACP25688.1
Conserved hypothetical protein.
  
     0.738
ACP24715.1
Hypothetical protein.
  
     0.718
ACP25186.1
Hypothetical protein.
  
     0.707
ACP23902.1
Hypothetical protein.
  
     0.697
ACP23962.1
Conserved hypothetical protein.
  
     0.659
ACP25287.1
Hypothetical protein.
  
     0.619
ACP24130.1
AsmA protein family precursor.
  
     0.583
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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