Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP24299.1Putative long-chain-fatty-acid--CoA ligase protein. (498 aa)    
Predicted Functional Partners:
ACP24399.1
long-chain-fatty-acid--CoA ligase.
 
0.978
ACP24009.1
Beta-ketoacyl synthase.
  
 0.974
ACP24298.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.870
bioY
Possible biotin synthesis BioY protein.
 
    0.826
bioN
Putative biotin transporter, permease protein BioN.
 
  
 0.778
bioM
Putative biotin transporter, ATP binding protein BioM.
 
     0.760
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.726
ACP24700.1
Putative long-chain-fatty-acid--CoA ligase.
  
     0.709
ACP23969.1
acyl-CoA dehydrogenase protein.
  
 
 0.702
ACP24286.1
acyl-CoA dehydrogenase domain protein.
  
 
 0.702
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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