Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACP24303.1Hypothetical protein. (399 aa)    
Predicted Functional Partners:
bioN
Putative biotin transporter, permease protein BioN.
       0.636
bioM
Putative biotin transporter, ATP binding protein BioM.
       0.636
bioY
Possible biotin synthesis BioY protein.
       0.572
ACP24304.1
Zn-dependent protease protein.
       0.565
ACP24305.1
Putative acetyltransferase.
       0.557
ACP24299.1
Putative long-chain-fatty-acid--CoA ligase protein.
  
    0.473
ACP24298.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.468
ACP27322.1
Possible acetyltransferase, GNAT family.
  
     0.416
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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