STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24373.1OmpA/MotB domain protein. (309 aa)    
Predicted Functional Partners:
motA
Chemotaxis protein motility protein A.
  
 
 0.963
ACP24372.1
Hypothetical protein.
 
 
   0.929
ACP27241.1
Putative chemotaxis protein methyltransferase.
  
  
 0.890
ACP27242.1
Putative signal transduction histidine kinase.
  
  
 0.890
cheA2
Chemotaxis protein CheA.
  
  
 0.884
ACP24374.1
Hypothetical protein.
 
     0.868
ACP24375.1
Superfamily II DNA/RNA helicase and SNF2 family-related protein.
 
     0.841
flgK
Predicted flagellar hook-associated protein FlgK.
  
  
 0.799
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
  
 0.756
flgD
Predicted flagellar hook capping protein FlgD.
  
  
 0.669
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.