STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24377.1Hypothetical protein. (414 aa)    
Predicted Functional Partners:
ACP24378.1
Hypothetical protein.
     0.994
iolB
Myo-inositol catabolism IolB domain protein.
   
    0.793
ACP24376.1
Superfamily I DNA and RNA helicases and helicasesubunits-like protein.
       0.668
ACP23937.1
N-6 DNA methylase.
  
  
 0.630
ACP24380.1
Putative transposase number 2 for insertion sequence NGRIS-11a.
       0.573
ACP24379.1
Putative transposase number 1 for insertion sequence NGRIS-11a; Belongs to the transposase 8 family.
       0.569
ACP26000.1
Hypothetical protein.
  
    0.466
ACP24381.1
Putative transposase number 3 for insertion sequence NGRIS-11a; Belongs to the transposase 25 family.
       0.453
ACP25730.1
Probable lipopolysaccharide modification acyltransferase.
  
    0.431
HsdR
Putative restriction endonuclease type I with R subunit / type III with Res subunit.
  
    0.426
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.