STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24389.1Carbon monoxide dehydrogenase small chain; COdehydrogenase subunit S; CO-DH S. (161 aa)    
Predicted Functional Partners:
ACP24387.1
Putative dehydrogenase.
 
 0.999
ACP26807.1
Carbon-monoxide dehydrogenase large subunit.
 
 0.996
ACP24390.1
Carbon monoxide dehydrogenase medium chain; COdehydrogenase subunit M; CO-DH M.
 
 0.993
xdhB
Xanthine dehydrogenase.
 
     0.967
ACP26806.1
Carbon monoxide dehydrogenase chain C.
 
 
 0.944
ACP25295.1
XdhC/CoxF family protein.
 
  
 0.818
ACP24388.1
Putative beta-lactamase-like protein.
       0.773
ACP25294.1
XdhC/CoxI family protein.
 
  
 0.770
ACP25296.1
Molybdopterin biosynthesis enzyme.
 
  
 0.691
ACP24391.1
Conserved hypothetical protein with CoxG domain.
       0.583
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.