STRINGSTRING
NGR_c06120 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c06120" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c06120annotation not available (424 aa)    
Predicted Functional Partners:
NGR_c06110
annotation not available (213 aa)
   
  0.992
NGR_c06150
annotation not available (108 aa)
 
          0.869
NGR_c06140
annotation not available (236 aa)
 
          0.857
NGR_c06170
Putative HTH-type transcriptional regulator in the TAR-I ttuE-ttuC’intergenic region; ORFX (236 aa)
 
          0.855
NGR_c06130
annotation not available (492 aa)
              0.845
NGR_c06160
beta-IPM dehydrogenase; IMDH; 3-IPM-DH (371 aa)
              0.835
NGR_c06180
annotation not available (289 aa)
              0.812
NGR_c06200
annotation not available (532 aa)
              0.718
NGR_c06190
annotation not available (326 aa)
              0.718
NGR_c06210
annotation not available (376 aa)
 
          0.644
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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