STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24410.1Putative HTH-type transcriptional regulator in the TAR-I ttuE-ttuC'intergenic region; ORFX. (236 aa)    
Predicted Functional Partners:
ACP24408.1
Hypothetical protein.
 
     0.810
ACP24405.1
Paral putative tRNA synthase.
 
     0.802
ACP24404.1
Putative L-fuculose-phosphate aldolase protein.
 
     0.784
ACP24411.1
Putative UDP-glucose 4-epimerase.
       0.768
ACP24409.1
beta-IPM dehydrogenase; IMDH; 3-IPM-DH.
       0.761
ACP24407.1
Probable haloacid dehalogenase.
       0.757
ACP24406.1
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.737
ACP24413.1
Putative ribose ABC transporter ATP-binding protein.
  
    0.675
ACP24412.1
Putative transmembrane component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.673
ACP25227.1
Putative transcriptional regulator, GntR family.
  
  
 0.623
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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