STRINGSTRING
NGR_c06230 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c06230" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c06230annotation not available (282 aa)    
Predicted Functional Partners:
NGR_c06220
annotation not available (241 aa)
 
          0.790
NGR_c02090
annotation not available (2500 aa)
   
 
  0.743
NGR_c04370
annotation not available (256 aa)
 
 
  0.542
NGR_c06140
annotation not available (236 aa)
 
          0.495
NGR_c06210
annotation not available (376 aa)
              0.462
NGR_c06150
annotation not available (108 aa)
 
          0.441
NGR_a03830
Uncharacterized short-chain type dehydrogenase/reductase y4eL; y4eL; NGR234_93; Belongs to the short-chain dehydrogenases/reductases (SDR) family (248 aa)
 
 
  0.428
pepD
annotation not available (500 aa)
              0.408
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (28%) [HD]