STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24416.1Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (282 aa)    
Predicted Functional Partners:
ACP24415.1
Putative dehalogenase.
 
    0.771
ACP24233.1
Short-chain dehydrogenase/reductase.
  
 
   0.690
ACP27166.1
Putative 3-oxoacyl-[acyl-carrier-protein] reductase related; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.638
ACP26731.1
Oxidoreductase.
  
 
   0.587
ACP25997.1
Putative short-chain dehydrogenase/reductase.
  
 
   0.576
ACP24407.1
Probable haloacid dehalogenase.
 
    0.560
ACP26858.1
Putative oxidoreductase (YgfF), NAD(P)-binding domain protein.
  
 
   0.544
ACP24009.1
Beta-ketoacyl synthase.
  
 
 0.518
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 
 0.513
ACP26296.1
Putative aminotransferase.
  
     0.513
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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