STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24419.1Hypothetical protein. (134 aa)    
Predicted Functional Partners:
ACP24418.1
Hypothetical protein.
      0.928
pepD
Aminoacyl-histidine dipeptidase.
       0.757
ACP24799.1
Predicted glycosyl transferase.
  
  
 0.750
ACP24420.1
Putative ribose ABC transporter, ribose-binding protein.
       0.598
ACP24423.1
L-ribulose-5-phosphate 4-epimerase; Phosphoribuloseisomerase.
  
    0.484
ACP24421.1
Putative ribose ABC transporter ATP-binding protein.
       0.482
ACP24422.1
Putative ribose ABC transporter; Permease; Belongs to the binding-protein-dependent transport system permease family.
       0.482
ACP24424.1
Putative L-ribulokinase.
       0.473
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.