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NGR_c06300 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c06300" - L-ribulose-5-phosphate 4-epimerase in Sinorhizobium fredii NGR234
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c06300L-ribulose-5-phosphate 4-epimerase; Phosphoribuloseisomerase (236 aa)    
Predicted Functional Partners:
NGR_c06310
annotation not available (538 aa)
 
 
  0.997
xylB
annotation not available (484 aa)
 
   
  0.943
araB
annotation not available (527 aa)
   
 
  0.929
rpe
annotation not available (224 aa)
       
  0.918
NGR_c06280
annotation not available (511 aa)
     
 
  0.848
NGR_c06290
Putative ribose ABC transporter; Permease; Belongs to the binding-protein-dependent transport system permease family (324 aa)
              0.834
NGR_c06270
annotation not available (367 aa)
 
          0.727
NGR_c06320
annotation not available (318 aa)
     
      0.710
ppdK
annotation not available (896 aa)
         
  0.550
NGR_c06110
annotation not available (213 aa)
 
     
  0.546
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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