STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24425.1Putative transcriptional regulatory protein, LysR family. (318 aa)    
Predicted Functional Partners:
ACP25592.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.712
ACP24952.1
Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.702
ACP27163.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.676
ACP24135.1
Putative LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.647
ACP24423.1
L-ribulose-5-phosphate 4-epimerase; Phosphoribuloseisomerase.
       0.623
ACP24424.1
Putative L-ribulokinase.
       0.623
ACP24421.1
Putative ribose ABC transporter ATP-binding protein.
       0.610
ACP24422.1
Putative ribose ABC transporter; Permease; Belongs to the binding-protein-dependent transport system permease family.
       0.610
ACP24177.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.589
ACP24426.1
Hypothetical protein.
       0.526
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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