STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24426.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
ACP24427.1
Putative exported solute binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
       0.588
ACP24425.1
Putative transcriptional regulatory protein, LysR family.
       0.526
ACP24428.1
Putative transporter DctQ-related transmembrane protein.
       0.465
ACP24429.1
Putative TRAP family transmembrane transporter protein.
       0.451
ACP24423.1
L-ribulose-5-phosphate 4-epimerase; Phosphoribuloseisomerase.
       0.433
ACP24424.1
Putative L-ribulokinase.
       0.433
ACP24421.1
Putative ribose ABC transporter ATP-binding protein.
       0.426
ACP24422.1
Putative ribose ABC transporter; Permease; Belongs to the binding-protein-dependent transport system permease family.
       0.426
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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