Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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ACP24427.1Putative exported solute binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (365 aa)    
Predicted Functional Partners:
ACP24429.1
Putative TRAP family transmembrane transporter protein.
 
  
 0.931
dctP
TRAP dicarboxylate transporter-DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 
0.926
ACP25707.1
Possible TRAP dicarboxylate transporter-DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 
0.918
ACP24428.1
Putative transporter DctQ-related transmembrane protein.
 
  
 0.913
dctQ
Tripartite ATP-independent periplasmictransporter, DctQ component.
 
  
 0.803
dctM
TRAP dicarboxylate transporter, DctM subunit.
 
  
 0.801
ACP25705.1
Possible TRAP C4-dicarboxylate transport system permeaseDctM subunit.
 
  
 0.801
ACP25706.1
Putative transporter dctQ related transmembrane protein.
 
  
 0.791
ACP24426.1
Hypothetical protein.
       0.588
ACP24425.1
Putative transcriptional regulatory protein, LysR family.
       0.412
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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