Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACP24431.1Putative transcriptional regulator, GntR family. (238 aa)    
Predicted Functional Partners:
ACP25091.1
Putative transcriptional regulator, GntR family.
  
  
 0.690
ACP25835.1
Putative transcriptional regulator, GntR family.
  
  
 0.688
ACP24343.1
Putative transcriptional regulator, GntR family.
  
  
 0.621
ACP24234.1
Putative IclR family transcriptional regulator.
 
  
 0.609
ACP26767.1
Putative transcriptional regulator, GntR family.
  
  
 0.583
ACP24432.1
Hypothetical protein.
       0.465
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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