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NGR_c06540 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c06540" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c06540annotation not available (515 aa)    
Predicted Functional Partners:
NGR_c06530
annotation not available (328 aa)
 
  0.984
NGR_c06520
annotation not available (327 aa)
 
  0.972
NGR_c06290
Putative ribose ABC transporter; Permease; Belongs to the binding-protein-dependent transport system permease family (324 aa)
   
  0.799
NGR_c06190
annotation not available (326 aa)
   
  0.795
NGR_c17360
annotation not available (335 aa)
   
  0.784
NGR_c33700
annotation not available (325 aa)
   
  0.773
NGR_a02490
Probable ABC transporter permease protein y4mJ; Probably part of the binding-protein-dependent transport system y4mIJK. This system probably transports a sugar. Probably responsible for the translocation of the substrate across the membrane (333 aa)
   
  0.767
NGR_c02470
annotation not available (326 aa)
   
  0.746
NGR_c06270
annotation not available (367 aa)
 
 
  0.724
NGR_c02480
annotation not available (334 aa)
   
  0.648
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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