STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24459.1Putative transcriptional regulator, LacI family. (325 aa)    
Predicted Functional Partners:
ACP25280.1
Predicted transcriptional regulator protein, LacI family.
  
     0.774
gltB1
Glutamate synthase [NADPH] large chain.
    
 
 0.743
ACP25549.1
Putative LacI family transcriptional regulator.
  
     0.736
ACP27119.1
Putative phosphotransferase system, phosphocarrier HPr protein.
 
 
 
 0.586
ACP26693.1
Putative transcriptional regulatory protein, LacI family.
 
  
 0.501
ribA
Riboflavin biosynthesis protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
   0.463
ACP24464.1
Beta-glucosidase; Gentiobiase; cellobiase; beta-D-glucoside glucohydrolase; Belongs to the glycosyl hydrolase 3 family.
 
   
 0.418
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
   0.407
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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