Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ACP24497.1Putative GGDEF/EAL sensory box protein. (598 aa)    
Predicted Functional Partners:
ACP26710.1
Sensory box/GGDEF family protein.
 
 
0.905
ACP24336.1
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain.
 
 
0.894
ACP26605.1
Putative response regulator/GGDEF domain transcriptional regulator.
 
 
 0.857
ACP24202.1
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain precursor.
 
 
0.842
ACP26659.1
Putative transmembrane sensory box GGDEF/EAL protein.
 
 
0.814
ACP25843.1
Conserved hypothetical protein.
 
  
 0.813
ACP26079.1
GGDEF family protein.
 
 
0.813
ACP26591.1
Putative GGDEF family regulator.
 
  
 0.810
ACP25470.1
GGDEF family protein.
 
  
 0.808
ACP25624.1
Probable two-component response regulator protein.
 
 
 0.806
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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