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NGR_c07040 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c07040" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c07040annotation not available (598 aa)    
Predicted Functional Partners:
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (520 aa)
   
 
  0.970
NGR_c18600
annotation not available (415 aa)
 
  0.856
cheA2
annotation not available (764 aa)
 
 
  0.823
NGR_c00280
annotation not available (755 aa)
 
  0.803
NGR_c04300
annotation not available (574 aa)
 
 
  0.790
NGR_c28590
annotation not available (628 aa)
 
  0.784
NGR_c04920
annotation not available (699 aa)
 
   
  0.780
NGR_c00850
annotation not available (665 aa)
 
   
  0.777
NGR_c32660
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (288 aa)
   
 
  0.776
rpoH
annotation not available (301 aa)
   
 
  0.776
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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