STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24516.1Hypothetical protein. (183 aa)    
Predicted Functional Partners:
ACP24593.1
Hypothetical membrane spanning protein.
  
     0.713
ACP26751.1
TPR repeat-containing protein; Similar to cellulose biosynthesis protein.
  
     0.696
ACP25646.1
Hypothetical protein.
  
     0.693
ACP25390.1
Hypothetical protein.
  
     0.672
ACP24541.1
Hypothetical protein.
  
     0.668
ACP25690.1
Putative NTP pyrophosphohydrolase protein, MuT/nudix family.
  
     0.663
ACP25068.1
Putative acetyltransferase protein.
  
     0.657
ACP27133.1
Hypothetical protein, putative membrane protein.
  
     0.653
ACP25766.1
Putative adenylate cyclase.
  
     0.641
ACP25758.1
Hypothetical protein.
  
     0.640
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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