Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mucRTranscriptional regulatory protein, Ros/MucR family; Could be involved in the regulation of exopolysaccharide synthesis. (143 aa)    
Predicted Functional Partners:
ACP26585.1
UPF0335 protein; Belongs to the UPF0335 family.
  
     0.593
ftsQ
Cell division protein FtsQ-like protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.585
exoR
Exopolysaccharide production negative regulator precursor.
      
 0.583
ACP25822.1
Hypothetical protein.
  
     0.576
secE
Putative preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
    0.561
ACP24550.1
Hypothetical protein.
       0.558
lptD
Putative organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.513
ACP26452.1
Hypothetical protein.
  
     0.512
ACP24695.1
DNA polymerase III, chi subunit protein.
  
     0.491
ACP25894.1
Transcriptional regulator, ArsR family.
  
   
 0.482
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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