STRINGSTRING
NGR_c07580 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c07580" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c07580annotation not available (143 aa)    
Predicted Functional Partners:
NGR_c27030
annotation not available (242 aa)
   
          0.704
ccrM
Adenine-specificmethyltransferase SmeIP; M.SmeI; M.CcrMI; Belongs to the N(4)/N(6)-methyltransferase family (376 aa)
   
     
  0.691
hisE
annotation not available (107 aa)
           
  0.661
NGR_c36180
annotation not available (206 aa)
           
  0.660
NGR_c19800
annotation not available (187 aa)
           
  0.660
NGR_c12490
annotation not available (202 aa)
           
  0.660
NGR_c07570
annotation not available (84 aa)
              0.613
lptD
LPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family (782 aa)
   
          0.545
NGR_c20590
annotation not available (170 aa)
   
          0.534
NGR_c09700
annotation not available (183 aa)
   
          0.517
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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