STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mucRTranscriptional regulatory protein, Ros/MucR family; Could be involved in the regulation of exopolysaccharide synthesis. (143 aa)    
Predicted Functional Partners:
ACP26585.1
UPF0335 protein; Belongs to the UPF0335 family.
  
     0.593
ftsQ
Cell division protein FtsQ-like protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.585
ACP25822.1
Hypothetical protein.
  
     0.576
ACP24550.1
Hypothetical protein.
       0.558
secE
Putative preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
    0.527
lptD
Putative organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.513
ACP26452.1
Hypothetical protein.
  
     0.512
exoR
Exopolysaccharide production negative regulator precursor.
      
 0.506
ACP24695.1
DNA polymerase III, chi subunit protein.
  
     0.491
ACP25894.1
Transcriptional regulator, ArsR family.
  
   
 0.478
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.