STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24565.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
ACP26022.1
Protein of unknown function UPF0047.
 
  
 0.654
ACP23905.1
Hypothetical protein contains Sel1-like domain.
 
     0.572
ACP25626.1
Putative guanylate/adenylate cyclase.
  
     0.540
ACP24360.1
Putative transmembrane protein.
 
     0.528
fhuF
Ferric iron reductase protein FhuF.
  
     0.528
ACP24566.1
Hypothetical protein.
       0.523
ACP24675.1
Hypothetical protein.
  
     0.492
cya4
Adenylate cyclase Cya3.
  
     0.472
ACP24622.1
Glycerophosphoryl diester phosphodiesterase.
 
     0.471
ACP26208.1
Conserved hypothetical protein.
  
     0.451
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.