Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACP24569.1Two-component response regulator protein. (223 aa)    
Predicted Functional Partners:
ACP24570.1
Two-component sensor histidine kinase protein.
 
 0.964
ACP27345.1
Putative sensory transduction histidine kinase.
 
 0.875
ACP27117.1
Sensory transduction histidine kinase.
 
 
 0.831
ACP24580.1
Two component sensor kinase.
 
 
 0.825
ACP24578.1
Sensor protein.
 
 
 0.820
ACP26773.1
Sensor protein.
 
 
 0.806
ACP25415.1
Two component sensor kinase.
 
 
 0.797
ACP24133.1
Predicted sensor histidine kinase protein with ATP-binding domain.
 
 
 0.787
phoR
Two component sensor histidine kinase protein, phosphate regulon sensor PhoR.
 
 
 0.759
ACP23985.1
Predicted two-component sensor histidine kinase.
 
 
 0.736
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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