STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24571.1Putative outer membrane protein. (138 aa)    
Predicted Functional Partners:
tolA
Putative TolA outer membrane protein.
  
     0.710
ACP26055.1
Hypothetical protein.
  
     0.570
cycH
Cytochrome c-type biogenesis protein CycH.
       0.549
ccmE
Putative cytochrome c-type biogenesis protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
       0.549
cycK
Cytochrome c-type biogenesis protein.
       0.549
cycL
Cytochrome c-type biogenesis protein CycL precursor; Possible subunit of a heme lyase.
       0.549
ACP25825.1
Hypothetical protein.
  
     0.496
ACP24649.1
Hypothetical protein.
 
     0.480
ACP24570.1
Two-component sensor histidine kinase protein.
     
 0.462
ACP25146.1
Hypothetical protein.
  
     0.430
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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