STRINGSTRING
NGR_c07780 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c07780" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c07780annotation not available (138 aa)    
Predicted Functional Partners:
cycH
annotation not available (381 aa)
 
          0.619
NGR_c22960
annotation not available (302 aa)
    
          0.564
ccmE
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (150 aa)
              0.563
cycL
Cytochrome c-type biogenesis protein; Possible subunit of a heme lyase (151 aa)
              0.562
cycK
annotation not available (662 aa)
              0.562
NGR_c33600
annotation not available (125 aa)
    
          0.560
NGR_c20620
annotation not available (1247 aa)
    
          0.487
NGR_c07770
annotation not available (461 aa)
              0.476
NGR_c07760
annotation not available (223 aa)
              0.475
NGR_c19140
annotation not available (163 aa)
    
          0.457
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (11%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >