STRINGSTRING
NGR_c07970 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c07970" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c07970annotation not available (302 aa)    
Predicted Functional Partners:
NGR_c07980
annotation not available (156 aa)
 
          0.671
NGR_c08110
annotation not available (194 aa)
   
          0.655
NGR_c23430
annotation not available (181 aa)
   
          0.511
NGR_c20360
annotation not available (77 aa)
   
          0.482
NGR_c11020
annotation not available (226 aa)
   
          0.438
NGR_c26270
annotation not available (989 aa)
 
   
  0.429
NGR_c18220
annotation not available (313 aa)
   
          0.416
NGR_c07660
annotation not available (94 aa)
   
          0.411
spsA
Uncharacterized HTH-type transcriptional regulator y4dL; y4dL; NGR234_65 (196 aa)
   
          0.403
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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