Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP24594.1Putative glycosyl transferase. (339 aa)    
Predicted Functional Partners:
ACP24593.1
Hypothetical membrane spanning protein.
 
  
 0.907
ACP24595.1
Hypothetical protein.
 
  
 0.877
ACP24799.1
Predicted glycosyl transferase.
 
  
 0.746
ugdH
UDP-glucose 6-dehydrogenase; UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH.
 
  
 0.642
ACP24802.1
Putative transmembrane succinoglycan biosynthesis transport protein.
  
  
 0.528
ACP24009.1
Beta-ketoacyl synthase.
  
 
 0.526
ACP24629.1
UDP-glucuronate 5'-epimerase; UDP-glucuronic acidepimerase.
 
  
 0.513
lpsE
Lipopolysaccharide core biosynthesis glycosyl transferase LpsE.
 
  
 0.424
lpsD
Lipopolysaccharide core biosynthesis glycosyltransferase LpsD.
 
  
 0.417
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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