STRINGSTRING
NGR_c08020 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c08020" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c08020annotation not available (318 aa)    
Predicted Functional Partners:
NGR_c08000
annotation not available (494 aa)
 
        0.896
NGR_c08010
annotation not available (339 aa)
 
          0.836
NGR_c24530
annotation not available (90 aa)
   
          0.706
NGR_c16800
annotation not available (92 aa)
   
          0.662
NGR_c36330
annotation not available (209 aa)
   
          0.634
NGR_c24650
annotation not available (64 aa)
   
          0.605
NGR_c07660
annotation not available (94 aa)
   
          0.596
NGR_c18770
annotation not available (98 aa)
   
          0.587
NGR_c26950
annotation not available (64 aa)
   
          0.580
NGR_c36300
annotation not available (119 aa)
   
          0.573
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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